Select tissue-specific eQTLs

Select tissue-specific eQTLs

Usage

select.ts.eQTL(x, ct.eQTL, id.tissue = -1, ncores = 1, ...)

Arguments

x

data

ct.eQTL

selected cross-tissue eQTLs from select.ct.eQTL

id.tissue

the index of tissue (cell type) to be considered. Default is -1, which returns the ts.eQTL for all tissues.

ncores

number of cores. If larger than 1, then use parallel computing.

...

Arguments passed on to soda_model_imp_single

gam

tuning parameter \(\gamma\) in EBIC criteria. Default is 1.

scale

whether to scale the expression and the genetic data when regressing the expression on the genetic data. Default is FALSE.

nF0

minimum size of the set