Wrapper for the naive double-dipping method
Usage
dd(sce, params, test.use = "t", q = 0.05)
Arguments
- sce
A SingleCellExperiment object
- params
parameters passed to the clustering step perform_clustering
- test.use
The hypothesis testing for DE test. Possible choices: t, wilcox, poisson, and negbinom
- q
nominal FDR level
Value
a vector of selected significant features